SGE executor¶
The SGE executor is used to run jobs on a cluster using the Sun Grid Engine workload manager.
When a jobs file is submitted, the qsub command is used for each job.
When the run command is invoked, this executor makes use of
qrsh.
Parameters¶
Accepted parameters for a job and its conversion into SGE parameters:
- cores:
-peif penv is passed, otherwise-l slots= - penv: option for -pe`
- memory :
-l h_vmem= - queue:
-q - time:
-l h_rt= - tasks:
-n - working_directory:
-wd - name:
-N
Important
configure the appropiate penv option in your
profile file.
In addition, the extra parameter is also available. In the time parameter, you can either use the QMap format or any of the SGE accepted formats.